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 Vol 14: Using GBrowse 2.0 to visualize and share next-generation sequence data.


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This article is from Briefings in Bioinformatics, volume 14.AbstractGBrowse is a mature web-based genome browser that is suitable for deployment on both public and private web sites. It supports most of genome browser features, including qualitative and quantitative wiggle tracks, track uploading, track sharing, interactive track configuration, semantic zooming and limited smooth track panning. As of version 2.0, GBrowse supports next-generation sequencing NGS data by providing for the direct display of SAM and BAM sequence alignment files. SAM-BAM tracks provide semantic zooming and support both local and remote data sources. This article provides step-by-step instructions for configuring GBrowse to display NGS data.



Autor: Stein, Lincoln D.

Fuente: https://archive.org/







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